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2017

V. Ladizhansky "Applications of solid-state NMR to membrane proteins," Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics (2017) online. http://dx.doi.org/10.1016/j.bbapap.2017.07.004

S. Milikisiyants, S. Wang, R.A. Munro, M. Donohue, M.E. Ward, D. Bolton, L.S. Brown, T.I. Smirnova, V. Ladizhansky, A.I. Smirnov "Oligomeric Structure of Anabaena Sensory Rhodopsin in a Lipid Bilayer Environment by Combining Solid-State NMR and Long-range DEER Constraints," Journal of Molecular Biology (2017) online. https://doi.org/10.1016/j.jmb.2017.05.005

M.L. Schmidt, J.H. Davis "Liquid Disordered–Liquid Ordered Phase Coexistence in Lipid/Cholesterol Mixtures: A Deuterium 2D NMR Exchange Study" Langmuir 33 (2017) 1881–1890. http://dx.doi.org/10.1021/acs.langmuir.6b02834

2016

S. Wang, C. Ing, S. Emami, Y. Jiang, H. Liang, R. Pomès, L.S. Brown, V. Ladizhansky, "Structure and Dynamics of Extracellular Loops in Human Aquaporin-1 from Solid-State NMR and Molecular Dynamics," J. Phys. Chem. B 120 (2016) 9887–9902. http://dx.doi.org/10.1021/acs.jpcb.6b06731

M.L. Schmidt, J.H. Davis, "Liquid Disordered - Liquid Ordered Phase Coexistence in Bicelles Containing Unsaturated Lipids and Cholesterol," Biochimica et Biophysica Acta (BBA) - Biomembranes 1858 (2016) 619-626. http://dx.doi.org/10.1016/j.bbamem.2015.12.016

J.H. Davis, I. Komljenovi, "Nuclear overhauser effect as a probe of molecular structure, dynamics and order of axially reorienting molecules in membranes," Biochimica et Biophysica Acta (BBA) - Biomembranes 1858 (2016) 295-303. http://dx.doi.org/10.1016/j.bbamem.2015.11.016

2015

M.E. Ward, E. Ritz, M.A.M. Ahmed, V.V. Bamm, G. Harauz, L.S. Brown, V. Ladizhansky, "Proton detection for signal enhancement in solid-state NMR experiments on mobile species in membrane proteins," Journal of Biomolecular NMR 63 (2015) 375-388. http://dx.doi.org/10.1007/s10858-015-9997-5

E. Mann, O.G. Ovchinnikova, J.D. King, C. Whitfield, "Bacteriophage-mediated Glucosylation Can Modify Lipopolysaccharide O-Antigens Synthesized by an ATP-binding Cassette (ABC) Transporter-dependent Assembly Mechanism," Journal of Biological Chemistry 290 (2015) 25561–25570. http://dx.doi.org/10.1074/jbc.M115.660803

M.W. Clarke, K.F. Boddington, J.M. Warnica, J. Atkinson, S. McKenna, J. Madge, C.H. Barker and S.P. Graether, "Structural and Functional Insights into the Cryoprotection of Membranes by the Intrinsically Disordered Dehydrins," Journal of Biological Chemistry 290 (2015) 26900-26913. http://dx.doi.org/10.1074/jbc.M115.678219

M.A. Voinov, D.B. Good, M.E. Ward, S. Milikisiyants, A. Marek, M.A. Caporini, M. Rosay, R.A. Munro, M. Ljumovic, L.S. Brown, V. Ladizhansky, A.I. Smirnov, "Cysteine-Specific Labeling of Proteins with a Nitroxide Biradical for Dynamic Nuclear Polarization NMR," J. Phys. Chem. B 119 (2015) 10180–10190. http://dx.doi.org/10.1021/acs.jpcb.5b05230

L.S. Brown and V. Ladizhansky, "Membrane proteins in their native habitat as seen by solid-state NMR spectroscopy," Protein Science 24 (2015) 1333–1346. (Review) http://dx.doi.org/10.1002/pro.2700

M.E. Ward, S. Wang, R. Munro, E. Ritz, I. Hung, P.L. Gor’kov, Y. Jiang, H. Liang, L.S. Brown, V. Ladizhansky, "In Situ Structural Studies of Anabaena Sensory Rhodopsin in the E. coli Membrane," Biophysical Journal 108 (2015) 1683–1696. http://dx.doi.org/10.1016/j.bpj.2015.02.018

M.E. Ward, L.S. Brown, V. Ladizhansky, "Advanced Solid-State NMR Techniques for Characterization of Membrane Protein Structure and Dynamics: Application to Anabaena Sensory Rhodopsin," Journal of Magnetic Resonance 253 (2015) 119-128. http://dx.doi.org/10.1016/j.jmr.2014.11.017

2014

progress S. Wang, V. Ladizhansky, "Recent advances in magic angle spinning solid state NMR of membrane proteins," Progress in Nuclear Magnetic Resonance Spectroscopy 82 (2014) 1–26. (Invited Review)
http://dx.doi.org/10.1016/j.pnmrs.2014.07.001

J.H. Davis, M.L. Schmidt, "Critical Behaviour in DOPC/DPPC/Cholesterol Mixtures: Static 2H NMR Line Shapes Near the Critical Point," Biophysical Journal 106 (2014) 1970–1978. http://dx.doi.org/10.1016/j.bpj.2014.03.037

V. Ladizhansky, "Recent Advances in Magic-Angle Spinning Solid-State NMR of Proteins," Israel Journal of Chemistry 54 (2014) 86–103. (Review) http://dx.doi.org/10.1002/ijch.201300096

M. Storek, K.R. Jeffrey, R. Böhmer, "Local-field approximation of homonuclear dipolar interactions in 7Li-NMR: Density-matrix calculations and random-walk simulations tested by echo experiments on borate glasses," Solid State Nuclear Magnetic Resonance 59-60 (2014) 8–19. http://dx.doi.org/10.1016/j.ssnmr.2014.01.002

D.B. Good, S. Wang, M.E. Ward, J.O. Struppe, L.S. Brown, J.R. Lewandowski, and V. Ladizhansky, "Conformational dynamics of a seven transmembrane helical protein Anabaena Sensory Rhodopsin probed by solid-state NMR," J. Am. Chem. Soc. 136 (2014) 2833–2842. http://dx.doi.org/10.1021/ja411633w

M.E. Ward, S. Wang, S. Krishnamurthy, H. Hutchins, M. Fey, L.S. Brown, V. Ladizhansky, "High-resolution paramagnetically enhanced solid-state NMR spectroscopy of membrane proteins at fast magic angle spinning," Journal of Biomolecular NMR 58 (2014) 37-47. http://dx.doi.org/10.1007/s10858-013-9802-2

L. Kuang, D.A. Fernandes, M. O’Halloran, W. Zheng, Y. Jiang, V. Ladizhansky, L.S. Brown, and H. Liang, "“Frozen” Block Copolymer Nanomembranes with Light-Driven Proton Pumping Performance," ACS Nano 8 (2014) 537–545. http://dx.doi.org/10.1021/nn4059852

2013

G.T. Debelouchina, M.J. Bayro, A.W.P. Fitzpatrick, V. Ladizhansky, M.T. Colvin, M.A. Caporini, C.P. Jaroniec, V.S. Bajaj, M.M. Rosay, C.E. MacPhee, M. Vendruscolo, W.E. Maas, C.M. Dobson, and R.G. Griffin, "Higher Order Amyloid Fibril Structure by MAS NMR and DNP Spectroscopy," J. Am. Chem. Soc. 135 (2013) 19237–19247. http://dx.doi.org/10.1021/ja409050a

C.J. Moore and F.-I. Auzanneau, "Understanding the Recognition of Lewis X by Anti-Lex Monoclonal Antibodies," Journal of Medicinal Chemistry 56 (2013) 8183–8190. http://dx.doi.org/10.1021/jm401304h

S. Wang, L. Shi, T. Okitsu, A. Wada, L.S. Brown, V. Ladizhansky, "Solid-state NMR 13C and 15N resonance assignments of a seven-transmembrane helical protein Anabaena Sensory Rhodopsin," Biomolecular NMR Assignments 7 (2013) 253-256. http://dx.doi.org/10.1007/s12104-012-9421-y

S. Wang, R.A. Munro, L. Shi, I. Kawamura, T. Okitsu, A. Wada, S.-Y. Kim, K.-H. Jung, L.S. Brown and V. Ladizhansky, "Solid-state NMR spectroscopy structure determination of a lipid-embedded heptahelical membrane protein," Nature Methods 10 (2013) 1007–1012. http://dx.doi.org/10.1038/nmeth.2635

J.H. Davis, L. Ziani, and M.L. Schmidt, "Critical fluctuations in DOPC/DPPC-d62/cholesterol mixtures: 2H magnetic resonance and relaxation," J. Chem. Phys. 139 (2013) 045104. http://dx.doi.org/10.1063/1.4816366

S. Emami, Y. Fan, R. Munro, V. Ladizhansky, L.S. Brown, "Yeast-expressed human membrane protein aquaporin-1 yields excellent resolution of solid-state MAS NMR spectra," Journal of Biomolecular NMR 55 (2013) 147-155. http://dx.doi.org/10.1007/s10858-013-9710-5

2012

S. Wang, R.A. Munro, S.-Y. Kim, K.-H. Jung, L.S. Brown, and V. Ladizhansky, "Paramagnetic Relaxation Enhancement Reveals Oligomerization Interface of a Membrane Protein," J. Am. Chem. Soc. 134 (2012) 16995–16998. http://dx.doi.org/10.1021/ja308310z

L.K. Greenfield, M.R. Richards, E. Vinogradov, W.W. Wakarchuk, T.L. Lowary and C. Whitfield, "Domain Organization of the Polymerizing Mannosyltransferases Involved in Synthesis of the Escherichia coli O8 and O9a Lipopolysaccharide O Antigens," Journal of Biological Chemistry 287 (2012) 38135-38149. http://dx.doi.org/10.1074/jbc.M112.412577

M.A.M. Ahmed, M. De Avila, E. Polverini, K. Bessonov, V.V. Bamm, and G. Harauz, "Solution NMR structure and molecular dynamics simulations of murine 18.5-kDa myelin basic protein segment (S72-S107) in association with dodecylphosphocholine micelles," Biochemistry 51 (2012) 7475–7487. http://dx.doi.org/10.1021/bi300998x

R. Webber, G.H. Penner, "A combined deuterium NMR and quantum chemical Investigation of inequivalent Hydrogen Bonds in organic Solids," Solid State Nuclear Magnetic Resonance 47-48 (2012) 10–18. http://dx.doi.org/10.1016/j.ssnmr.2012.07.002

M. Zaccheus, R. Pendrill, T.A. Jackson, A. Wang, F.-I. Auzanneau, G. Widmalm, "Conformational Dynamics of a Central Trisaccharide Fragment of the LeaLex Tumor Associated Antigen Studied by NMR Spectroscopy and Molecular Dynamics Simulations," European Journal of Organic Chemistry 2012 (2012) 4705–4715. http://dx.doi.org/10.1002/ejoc.201200569

L. Shi, V. Ladizhansky, "Magic Angle Spinning Solid-State NMR Experiments for Structural Characterization of Proteins," Methods in Molecular Biology 895 (2012) 153-165. http://dx.doi.org/10.1007/978-1-61779-927-3_12
in " Intrinsically Disordered Protein Analysis : Volume 1, Methods and Experimental Tools" Springer Series Book http://dx.doi.org/10.1007/978-1-61779-927-3

A. Acosta-Ramirez, M. Bertoli, D.G. Gusev and M. Schlaf, "Homogeneous catalytic hydrogenation of long-chain esters by an osmium pincer complex and its potential application in the direct conversion of triglycerides into fatty alcohols," Green Chem. 14 (2012) 1178-1188. http://dx.doi.org/10.1039/C2GC15960K

2011

M.E. Ward, L. Shi, E.M.R. Lake, S. Krishnamurthy, H. Hutchins, L.S. Brown, and V. Ladizhansky, "Proton Detected Solid-State NMR Reveals Intramembrane Polar Networks in a Seven-Helical Transmembrane Protein Proteorhodopsin," J. Am. Chem. Soc. 133 (2011) 17434–17443. http://dx.doi.org/10.1021/ja207137h

G.H. Penner, R. Webber, L.A. O’Dell, "A multinuclear NMR and quantum chemical study of solid trimethylammonium chloride," Canadian Journal of Chemistry 89 (2011) 1036-1046. (Special Issue) http://dx.doi.org/10.1139/v11-034

S. Wang, L. Shi, I. Kawamura, L.S. Brown, and V. Ladizhansky, "Site-Specific Solid-State NMR Detection of Hydrogen-Deuterium Exchange Reveals Conformational Changes in a 7-Helical Transmembrane Protein," Biophysical Journal 101 (2011) L23-L25. http://dx.doi.org/10.1016/j.bpj.2011.06.035

S. Wang, S.Y. Kim, K.-H. Jung, V. Ladizhansky, L.S. Brown, "A Eukaryotic-like Interaction of Soluble Cyanobacterial Sensory Rhodopsin Transducer with DNA," Journal of Molecular Biology 411 (2011) 449-462. http://dx.doi.org/10.1016/j.jmb.2011.06.002

C.B. Schroeder and K.R. Jeffrey, "Rheo-NMR of the Secondary Flow of Non-Newtonian Fluids in Square Ducts," Phys Rev Lett 106 (2011) 046001. http://dx.doi.org/10.1103/PhysRevLett.106.046001

Y. Fan, L. Shi, V. Ladizhansky and L.S. Brown, "Uniform isotope labeling of a eukaryotic seven-transmembrane helical protein in yeast enables high-resolution solid-state NMR studies in the lipid environment," Journal of Biomolecular NMR 49 (2011) 151-161. (F1000 evaluation)
http://dx.doi.org/10.1007/s10858-011-9473-9

L. Shi, I. Kawamura, K.-H. Jung, L.S. Brown, and V. Ladizhansky, "Conformation of a Seven-Helical Transmembrane Photosensor in the Lipid Environment," Angewandte Chemie International Edition 50 (2011) 1302-1305. http://dx.doi.org/10.1002/anie.201004422

S. Hughes and S.P. Graether, "Cryoprotective mechanism of a small intrinsically disordered dehydrin protein," Protein Science 20 (2011) 42–50. http://dx.doi.org/10.1002/pro.534

2010

S.N. Patel and S.P. Graether, "Increased flexibility decreases antifreeze protein activity," Protein Science 19 (2010) 2356-2365. http://dx.doi.org/10.1002/pro.516

EMR V. Ladizhansky, "Dipolar-Based Torsion Angle Measurements for Protein Structure Determination," Chapter 14, Solid-State NMR Studies of Biopolymers (EMR Books), Eds. A.E. McDermott and T. Polenova, Wiley (2010) pp. 273-284. http://dx.doi.org/10.1002/9780470034590.emrstm1153

M.A.M. Ahmed, V.V. Bamm, G. Harauz, V. Ladizhansky, "Solid-State NMR Spectroscopy of Membrane-Associated Myelin Basic Protein—Conformation and Dynamics of an Immunodominant Epitope," Biophysical Journal 99 (2010) 1247-1255. http://dx.doi.org/10.1016/j.bpj.2010.06.022

A.D. Bain, D.W. Hughes, C.K. Anand, Z. Nie, V.J. Robertson, "Problems, artifacts and solutions in the INADEQUATE NMR experiment," Magnetic Resonance in Chemistry48 (2010) 630-641. http://dx.doi.org/10.1002/mrc.2639

D.S. Libich, M.A.M. Ahmed, L. Zhong, V.V. Bamm, V. Ladizhansky, and G. Harauz, "Fuzzy complexes of myelin basic protein: NMR spectroscopic investigations of a polymorphic organizational linker of the central nervous system," Biochem. Cell Biol. 88 (2010) 143–155. (Review) http://dx.doi.org/10.1139/O09-123

R. Janik, E. Ritz, A. Gravelle, L. Shi, X. Peng, V. Ladizhansky, "Inter-residue carbonyl-carbonyl polarization transfer experiments in uniformly 13C, 15N-labeled peptides and proteins," Journal of Magnetic Resonance 203 (2010) 177-184. http://dx.doi.org/10.1016/j.jmr.2009.12.014

2009

EMR K.R. Jeffrey, G.H. Penner "Structural Phase Transitions," Chapter 26, NMR Crystallography EMR Handbook, Eds. R.K. Harris, R.E. Wasylishen, M.J. Duer, Wiley (2009) pp. 387-413. http://dx.doi.org/10.1002/9780470034590.emrstm1051

C. Cousins, G.H. Penner, B. Liu, P. Beckett, G. Spiers, "Organic matter degradation in paper sludge amendments over gold mine tailings," Applied Geochemistry 24 (2009) 2293-2300. http://dx.doi.org/10.1016/j.apgeochem.2009.09.009

L. Shi, E.M.R. Lake, M.A.M. Ahmed, L.S. Brown, V. Ladizhansky, "Solid-state NMR study of proteorhodopsin in the lipid environment: Secondary structure and dynamics," Biochimica et Biophysica Acta (BBA) - Biomembranes 1788 (2009) 2563-2574. http://dx.doi.org/10.1016/j.bbamem.2009.09.011

J. Juhasz, F.J. Sharom, J.H. Davis, "Quantitative Characterization of Coexisting Phases in DOPC/DPPC/cholesterol Mixtures: Comparing Confocal Fluorescence Microscopy and Deuterium Nuclear Magnetic Resonance," Biochimica et Biophysica Acta (BBA) - Biomembranes 1788 (2009) 2541-2552. http://dx.doi.org/10.1016/j.bbamem.2009.10.006

G. Harauz, V. Ladizhansky, J.M. Boggs, "Structural Polymorphism and Multifunctionality of Myelin Basic Protein," Biochemistry 48 (2009) 8094-8104. (Current Topic) http://dx.doi.org/10.1021/bi901005f

O. Julien, S.P. Graether, B.D. Sykes, "Monitoring Prion Protein Stability by NMR," Journal of Toxicology and Environmental Health A 72 (2009) 1069-1074. http://dx.doi.org/10.1080/15287390903084504

V. Ladizhansky, "Homonuclear dipolar recoupling techniques for structure determination in uniformly 13C-labeled proteins," Solid State Nuclear Magnetic Resonance36 (2009) 119-128. http://dx.doi.org/10.1016/j.ssnmr.2009.07.003

M. Aluas, C. Tripon, J.M. Griffin, X. Filip, V. Ladizhansky, R.G. Griffin, S.P. Brown, C. Filip, "CHHC and 1H-1H Magnetization Exchange: Analysis by Experimental Solid-State NMR and 11-Spin Density-Matrix Simulations," Journal of Magnetic Resonance 199 (2009) 173-187. http://dx.doi.org/10.1016/j.jmr.2009.04.013

J.H. Davis, J.J. Clair, J. Juhasz, "Phase Equilibria in DOPC/DPPC-d(62)/Cholesterol Mixtures," Biophysical Journal 96 (2009) 521-539. http://dx.doi.org/10.1016/j.bpj.2008.09.042

T.A. Jackson, V. Robertson, A. Imberty, F.I. Auzanneau, "The flexibility of the Le(a)Le(x) Tumor Associated Antigen central fragment studied by systematic and stochastic searches as well as dynamic simulations," Bioorganic & Medicinal Chemistry 17 (2009) 1514-1526. http://dx.doi.org/10.1016/j.bmc.2009.01.020

L. Shi, M.A.M. Ahmed, W. Zhang, G. Whited, L.S. Brown, V. Ladizhansky, "Three-dimensional solid-state NMR study of a seven-helical integral membrane proton pump – structural insights," Journal of Molecular Biology 386 (2009) 1078-1093. http://dx.doi.org/10.1016/j.jmb.2009.01.011

G. Harauz, V. Ladizhansky, "Structure and dynamics of the myelin basic protein (MBP) family by solution and solid-state NMR". Chapter X (pp 196-231) in J.M. Boggs (editor), "Myelin Basic Protein", Series on "Intrinsically Disordered Proteins" (edited by V. Uversky). Nova Science Publishers, 2008.

M.A.M. Ahmed, V.V. Bamm, L. Shi, M. Steiner-Mosonyi, J.F. Dawson, L. Brown, G. Harauz, V. Ladizhansky, "Induced Secondary Structure and Polymorphism in an Intrinsically Disordered Structural Linker of the CNS: Solid-State NMR and FTIR Spectroscopy of Myelin Basic Protein Bound to Actin," Biophysical Journal 96 (2009) 180-191. http://dx.doi.org/10.1016/j.bpj.2008.10.003

2008

T. Hasiuk, K.R. Jeffrey, "6Li NMR in lithium borate glasses," Solid State Nuclear Magnetic Resonance 34 (2008) 228-239. http://dx.doi.org/10.1016/j.ssnmr.2008.09.003

N. Riddell, G. Arsenault, A. Lough, A. McAlees, R. McCrindle, J. Meissner, V. Robertson, "The three-dimensional structural characterization of hexachlorocyclopentenyl-dibromocyclooctane (HCDBCO)," Chemosphere 73 (2008) 479-483. http://dx.doi.org/10.1016/j.chemosphere.2008.06.047

G. Arsenault, B. Chittim, J. Gu, A. McAlees, R. McCrindle and V. Robertson, "Separation and fluorine nuclear magnetic resonance spectroscopic (19F NMR) analysis of individual branched isomers present in technical perfluorooctanesulfonic acid (PFOS)," Chemosphere 73 (2008) S53-S59. http://dx.doi.org/10.1016/j.chemosphere.2007.06.096

L. Shi, X. Peng, M.A.M. Ahmed, D. Edwards, L.S. Brown. and V. Ladizhansky, "Resolution enhancement by homonuclear J-decoupling: application to three-dimensional solid-state magic angle spinning NMR spectroscopy," Journal of Biomolecular NMR 41 (2008) 9-15. http://dx.doi.org/10.1007/s10858-008-9233-7

X. Peng, D. Libich, R. Janik, G. Harauz, and V. Ladizhansky, "Dipolar Chemical Shift Correlation Spectroscopy for Homonuclear Carbon Distance Measurements in Proteins in the Solid State: Application to Structure Determination and Refinement," Journal of the American Chemical Society 130 (2008) 359-369. http://dx.doi.org/10.1021/ja076658v

2007

M.A. Ahmed, V.V. Bamm, G. Harauz , V. Ladizhansky, "The BG21 isoform of Golli myelin basic protein is intrinsically disordered with a highly flexible amino-terminal domain," Biochemistry 46 (2007) 9700-9712. http://dx.doi.org/10.1021/bi700632x

L. Zhong, V. V. Bamm, M.A.M. Ahmed, G. Harauz and V. Ladizhansky, "Solid-state NMR spectroscopy of 18.5 kDa myelin basic protein reconstituted with lipid vesicles: Spectroscopic characterisation and spectral assignments of solvent-exposed protein fragments," Biochimica et Biophysica Acta (BBA) Biomembranes 1768 (2007) 3193-3205. http://dx.doi.org/10.1016/j.bbamem.2007.08.013

R. Janik, X.H. Peng, V. Ladizhansky, "13C-13C distance measurements in U-(CN)-13C-15N-labeled peptides using rotational resonance width experiment with a homogeneously broadened matching condition," Journal of Magnetic Resonance 188 (2007) 129-140. http://dx.doi.org/10.1016/j.jmr.2007.06.005

R. Bohmer, K.R. Jeffrey, M. Vogel, "Solid-state 6Li 7Li NMR with applications to the translational dynamics in ion conductors" Progress In Nuclear Magnetic Resonance Spectroscopy 50 (2007) 87-174.
http://dx.doi.org/10.1016/j.pnmrs.2006.12.001

E.W. Murage, P. Voroney, R.P. Beyaert, "Turnover of carbon in the free light fraction with and without charcoal as determined using the 13C natural abundance method" Geoderma 138 (2007) 133-143.
http://dx.doi.org/10.1016/j.geoderma.2006.11.002

2006

G.H. Penner, A. McCullough, "Solid-State 15N NMR and Quantum Chemical Study of N,N-Dimethylaniline Derivatives" Journal of Organic Chemistry 71 (2006) 8794-8799. http://dx.doi.org/10.1021/jo061491u

G.H. Penner, X. Liu, "Silver 109Ag NMR spectroscopy," Progress in Nuclear Magnetic Resonance Spectroscopy 49 (2006) 151–167. http://dx.doi.org/10.1016/j.pnmrs.2006.06.004

K. Deka, B, MacMillan, G.R. Ziegler, A.G. Marangoni, B. Newling, B.J. Balcom, "Spatial mapping of solid and liquid lipid in confectionery products using a ID centric SPRITE MRI technique" Food Research International 39 (2006) 365-371. http://dx.doi.org/10.1016/j.foodres.2005.08.009